fix(cron): wire context_from through the update action

The tool schema promised 'On update, pass an empty array to clear' but the
update branch ignored the context_from kwarg entirely — users could set
the field at create time and never modify or clear it afterward.

- tools/cronjob_tools.py: handle context_from in the update branch the
  same way script/enabled_toolsets/workdir are handled: normalize str/list
  to refs, validate each referenced job exists (same check the create
  branch does), store as list-or-None to match create_job()'s shape.
  Empty string or empty list clears the field.
- tests/cron/test_cron_context_from.py: 6 new tests covering add/change/
  clear (both shapes)/bad-ref/preserve-across-unrelated-update.

tests/cron/test_cron_context_from.py

@@ -266,3 +266,125 @@ class TestBuildJobPromptContextFrom:
         # Should not crash and should not inject anything malicious
         assert "Process" in prompt
         assert "etc/passwd" not in prompt
+
+
+
+class TestUpdateContextFrom:
+    """Verify the cronjob tool's `update` action wires context_from through.
+
+    Without this, the create-path stores the field but users can never modify
+    or clear it via the tool (schema promises "pass an empty array to clear").
+    """
+
+    def test_update_adds_context_from_to_existing_job(self, cron_env):
+        from cron.jobs import create_job, get_job
+        from tools.cronjob_tools import cronjob
+        import json
+
+        job_a = create_job(prompt="Find news", schedule="every 1h")
+        job_b = create_job(prompt="Summarize", schedule="every 2h")
+        assert job_b.get("context_from") is None
+
+        result = json.loads(cronjob(
+            action="update",
+            job_id=job_b["id"],
+            context_from=job_a["id"],
+        ))
+        assert result["success"] is True
+
+        reloaded = get_job(job_b["id"])
+        assert reloaded["context_from"] == [job_a["id"]]
+
+    def test_update_changes_context_from_reference(self, cron_env):
+        from cron.jobs import create_job, get_job
+        from tools.cronjob_tools import cronjob
+        import json
+
+        job_a = create_job(prompt="Find news", schedule="every 1h")
+        job_a2 = create_job(prompt="Find weather", schedule="every 1h")
+        job_b = create_job(
+            prompt="Summarize", schedule="every 2h", context_from=job_a["id"],
+        )
+        assert job_b["context_from"] == [job_a["id"]]
+
+        result = json.loads(cronjob(
+            action="update",
+            job_id=job_b["id"],
+            context_from=[job_a2["id"]],
+        ))
+        assert result["success"] is True
+        assert get_job(job_b["id"])["context_from"] == [job_a2["id"]]
+
+    def test_update_clears_context_from_with_empty_list(self, cron_env):
+        from cron.jobs import create_job, get_job
+        from tools.cronjob_tools import cronjob
+        import json
+
+        job_a = create_job(prompt="Find news", schedule="every 1h")
+        job_b = create_job(
+            prompt="Summarize", schedule="every 2h", context_from=job_a["id"],
+        )
+        assert get_job(job_b["id"])["context_from"] == [job_a["id"]]
+
+        result = json.loads(cronjob(
+            action="update",
+            job_id=job_b["id"],
+            context_from=[],
+        ))
+        assert result["success"] is True
+        assert get_job(job_b["id"])["context_from"] is None
+
+    def test_update_clears_context_from_with_empty_string(self, cron_env):
+        from cron.jobs import create_job, get_job
+        from tools.cronjob_tools import cronjob
+        import json
+
+        job_a = create_job(prompt="Find news", schedule="every 1h")
+        job_b = create_job(
+            prompt="Summarize", schedule="every 2h", context_from=job_a["id"],
+        )
+
+        result = json.loads(cronjob(
+            action="update",
+            job_id=job_b["id"],
+            context_from="",
+        ))
+        assert result["success"] is True
+        assert get_job(job_b["id"])["context_from"] is None
+
+    def test_update_rejects_unknown_job_reference(self, cron_env):
+        from cron.jobs import create_job
+        from tools.cronjob_tools import cronjob
+        import json
+
+        job_b = create_job(prompt="Summarize", schedule="every 2h")
+
+        result = json.loads(cronjob(
+            action="update",
+            job_id=job_b["id"],
+            context_from=["deadbeef0000"],
+        ))
+        assert result["success"] is False
+        assert "not found" in result["error"]
+
+    def test_update_preserves_context_from_when_not_passed(self, cron_env):
+        """Updating other fields must not clobber context_from."""
+        from cron.jobs import create_job, get_job
+        from tools.cronjob_tools import cronjob
+        import json
+
+        job_a = create_job(prompt="Find news", schedule="every 1h")
+        job_b = create_job(
+            prompt="Summarize", schedule="every 2h", context_from=job_a["id"],
+        )
+
+        # Update an unrelated field
+        result = json.loads(cronjob(
+            action="update",
+            job_id=job_b["id"],
+            prompt="Summarize v2",
+        ))
+        assert result["success"] is True
+        reloaded = get_job(job_b["id"])
+        assert reloaded["prompt"] == "Summarize v2"
+        assert reloaded["context_from"] == [job_a["id"]]

tools/cronjob_tools.py

@@ -382,6 +382,24 @@ def cronjob(
                     if script_error:
                         return tool_error(script_error, success=False)
                 updates["script"] = _normalize_optional_job_value(script) if script else None
+            if context_from is not None:
+                # Empty string / empty list clears the field; otherwise validate
+                # each referenced job exists before storing. Normalized to a list
+                # (or None) to match the shape stored by create_job().
+                if isinstance(context_from, str):
+                    refs = [context_from.strip()] if context_from.strip() else []
+                else:
+                    refs = [str(j).strip() for j in context_from if str(j).strip()]
+                if refs:
+                    from cron.jobs import get_job as _get_job
+                    for ref_id in refs:
+                        if not _get_job(ref_id):
+                            return tool_error(
+                                f"context_from job '{ref_id}' not found. "
+                                "Use cronjob(action='list') to see available jobs.",
+                                success=False,
+                            )
+                updates["context_from"] = refs or None
             if enabled_toolsets is not None:
                 updates["enabled_toolsets"] = enabled_toolsets or None
             if workdir is not None:
@@ -508,7 +526,6 @@ Important safety rule: cron-run sessions should not recursively schedule more cr
             "workdir": {
                 "type": "string",
                 "description": "Optional absolute path to run the job from. When set, AGENTS.md / CLAUDE.md / .cursorrules from that directory are injected into the system prompt, and the terminal/file/code_exec tools use it as their working directory — useful for running a job inside a specific project repo. Must be an absolute path that exists. When unset (default), preserves the original behaviour: no project context files, tools use the scheduler's cwd. On update, pass an empty string to clear. Jobs with workdir run sequentially (not parallel) to keep per-job directories isolated."
-
             },
         },
         "required": ["action"]